Publications

[ submitted ][2023 ][2022 ][ 2021 ] [ 2020 ] [ 2019 ] [ 2018 ] [ 2017 ] [ 2016 ] [ 2015 ] [ 2014 ] [ 2012 ] [ 2011 ] [ 2010 ] [ 2009 ] [ 2008 ] [ 2007 ] [ 2006 ] [ 2005 ] [ 2004 ] [ 2003 ]


Submitted

129Criticality in an imidazolium ionic liquid fully wetting a sapphire support
K. Höllring, N. Vučemilović-Alagić, D. M. Smith, A.-S. Smith
submitted to Journal of Colloid And Interface Science, February 2024
128Quantitative Assessment of Hydrophilicity/Hydrophobicity in Mesoporous Silica by combining Adsorption, Liquid Intrusion and solid-state NMR spectroscopy
Cuadrado Collados C, Huber C, Söllner J, Grass J-P, Inayat A, Durdyyev R, Ana Smith , Dorothea Wisser, Martin Hartmann, Matthias Thommes
submitted to ChemRxiv. November 2023
Preprint DOI: 10.26434/chemrxiv-2023-tgk5g
127Metachronal coordination at the mesoscale
S. Ziegler, M. Delens, Y. Collard, M. Hubert, N. Vandewalle, and A.-S. Smith
submitted to Phys. Rev. Lett., May 2023
126Capturing the mechanosensitivity of cell proliferation in models of epithelium
K. Höllring, L. Nuić, L. Rogić, S. Kaliman, S. Gehrer, C. Wollnik, F. Rehfeldt, M. Hubert and A.-S. Smith
submitted to PNAS, May 2023
BioRxiv
DOI: 10.1101/2023.01.31.526438
125Microswimming with Inertia
O. Trosman, A. Sukhov, J. Pande, S. Ziegler, M. Hubert, J. Harting, and A.-S. Smith
in preparation for Phys. Rev. Fluids, 2020

2024

124Influence of Molecular Hydrogen on Bulk and Interfacial Properties of Three Imidazolium-Based Ionic Liquids by Experiments and Molecular Dynamics Simulations
Z. Zhai, G. Hantal, A. Cherian, A. Bergen, J. Chu, C. R. Wick, K. Meyer, A.-S. Smith,T. M. Koller
accepted to International Journal of Hydrogen Energy, May 2024
ChemRxiv preprint DOI: 10.26434/chemrxiv-2024-fbs38
123Membrane Fluctuation Model for Understanding the Effect of Receptor Nanoclustering on the Activation of Natural Killer Cells through Biomechanical Feedback
A. Pandey, P. Nowakowski, C. Ureña Martin, M. Abu Ahmad, A. Edri, E. Toledo, S. Tzadka, J. Walther, G. Le Saux, A. Porgador, A.-S. Smith, M.  Schvartzman 
Nano Lett. 24, 18, 5395–5402, April 2024
DOI: 10.1021/acs.nanolett.3c02815
Associated research data is available at ZENODO: https://doi.org/10.5281/zenodo.11033490
122Dislike of general opinion makes for tight elections
O. Devauchelle, P. Szymczak, and P. Nowakowski
Phys. Rev. E, 109, 044106, April 2024
DOI: 10.1103/PhysRevE.109.044106
121Anisotropic molecular diffusion in confinement II: A model for structurally complex particles applied to transport in thin ionic liquid films
K. Höllring, A. Baer, N. Vučemilović-Alagić, D. M. Smith, A.-S. Smith
Journal of Colloid And Interface Science,Volume 657, March 2024, Pages 272-289
DOI: 10.1016/j.jcis.2023.11.137
Code available on github: https://github.com/puls-group/diffusion_in_slit_pores (ZENODO archive: 10.5281/zenodo.7446070)
Associated research data is available at ZENODO: 10.5281/zenodo.10201004
120A Digital Twin to Overcome Long-time Challenges in Photovoltaics
L. Lüer; M. Peters; A.-S. Smith; E. Dorschky; B. M. Eskofier; F. Liers; Jörg Franke; Martin Sjarov; Matthias Brossog; Dirk Guldi; Andreas Maier; Christoph J. Brabec
Joule, January 2024
DOI:10.1016/j.joule.2023.12.010

2023

119Demixing of homogeneous binary lipid membranes induced by protein inclusions
P. Nowakowski, B.H. Stumpf, A.-S. Smith, A Maciołek
Phys. Rev. E, 107, 054120, May 2023
DOI: 10.1103/PhysRevE.107.054120
118The Stokes-Einstein-Sutherland equation at the nanoscale revisited
A. Baer, S. E. Wawra, K. Bielmeier, M. J. Uttinger, D. Smith, W. Peukert, J. Walter, A.-S. Smith
Small, October 2023, 2304670
DOI: 10.1002/smll.202304670
Associated research data is available at ZENODO: 10.5281/zenodo.8281244
117Morphology as indicator of adaptive changes of model tissues in osmotically and chemically changing environments
K. Höllring, D. Vurnek, S. Gehrer, D. Dudziak , M. Hubert, and A.-S. Smith
Biomaterials Advances, Volume 154, November 2023, 213635
DOI: 10.1016/j.bioadv.2023.213635
Associated research data is available at ZENODO: 10.5281/zenodo.8390432
116Block Chemistry for Accurate Modeling of Epoxy Resins
M. Livraghi, S. Pahi, P. Nowakowski, D. M. Smith, C. R. Wick, A.-S. Smith
Journal Physical Chemistry: B August 2023, 127, 7648–7662
DOI: 10.1021/acs.jpcb.3c04724
Associated research data is available at ZENODO: 10.5281/zenodo.5795935
115Mesoscopic modelling of epithelial tissues
K. Höllring and A.-S. Smith, (2022) to be published in Active Matter, edited by Giovanni Volpe, Nuno Araújo, Giorgio Volpe, Agnese Callegari
arXiv
DOI: 10.48550/ARXIV.2212.09547 (accepted)
114Anisotropic molecular diffusion in confinement I: Transport of small particles in potential and density gradients
K. Höllring, A. Baer, N. Vučemilović-Alagić, D. M. Smith, A.-S. Smith
JCIS, 650, Part B, 1930-1940 November 2023
DOI: 10.1016/j.jcis.2023.07.088
Code available on github: https://github.com/puls-group/diffusion_in_slit_pores (ZENODO: 10.5281/zenodo.7446070)
113Mechanistic Insight into Solution-Based Atomic Layer Deposition of CuSCN Provided by In Situ and Ex Situ Methods
F. Hilpert, P.-C. Liao, E. Franz, V. Koch, L. Fromm, E. Topraksal, A. Görling, A.-S. Smith, M. Barr, J. Bachmann, O. Brummel and J. Libuda
ACS Appl. Mater. Interfaces 15, 15, 19536–19544, April 2023
DOI: 10.1021/acsami.2c16943
112Stochastic dynamics of substrate non-uniform stiffness affecting molecular adhesion in cell-substrate interface subjected to tensile loading
C. Qi, J. Zhang, A.-S. Smith and L. Li
Journal of Applied Physics, 133, 22, June 2023.
DOI: 10.1063/5.0144595
111Observing membrane and cell adhesion via Reflection Interference Contrast Microscopy (RICM)
A. Abdelrahman, A.-S Smith, K. Sengupta, (2022) The Immune Synapse: Methods and Protocols, Second Edition, edited by C. T. Baldari and M. L. Dustin.
Springer Science, April 2023, Vol 2654, 123 – 135
DOI:10.1007/978-1-0716-3135-5_8
110Lattice Boltzmann simulations of two linear microswimmers using the immersed boundary method
D. Geyer, S. Ziegler, A. Sukhov, M. Hubert, A.-S. Smith, O. Aouane, P. Malgaretti, and J. Harting
Commun. Comput. Phys. 33,1, pp 310-329, 2023.
DOI: 10.4208/cicp.OA-2022-0056

2022

109Overload wave-memory induces amnesia of a self-propelled particle
M. Hubert, S. Perrard, N. Vandewalle, M. Labousse
Nat Commun 13, 4357, 2022
DOI: 10.1038/s41467-022-31736-z
108Modelling diffusive transport of particles interacting with slit nanopore walls: The case of fullerenes in toluene filled alumina pores
A. Baer, P. Malgaretti, M. Kaspereit, J. Harting, A-S. Smith
Journal of Molecular Liquids, Volume 368, Part B, 2022
DOI: 10.1016/j.molliq.2022.120636
107Sb2Se3 Thin Film Growth by Solution Atomic Layer Deposition
V. M. Koch, J. Charvot, Y. Cao, C Hartmann, R. G. Wilks, I. Kundrata, I. M-B M-Bacho, N. Gheshlaghi, F. Hoga, T. Stubhan, W. Alex, D. Pokorný, E. Topraksal, A-S Smith, C. J. Brabec, M. Bär, D. M. Guldi, M. K. S. Barr, F. Bureš, and J. Bachmann
Chem. Mater., 34, 21, 9392–9401, 2022
DOI: 10.1021/acs.chemmater.2c01550 Download
106Evaluating the predictive character of the method of constrained geometries simulate external force with density functional theory
C. R. Wick, E. Topraksal, D.M. Smith, and A.-S. Smith
Forces in Mechanics, 9, 100143, 2022
DOI:10.1016/j.finmec.2022.100143 Download
Associated research data is available at ZENODO: 10.5281/zenodo.6948604
Source-Code is available via: doi.org/10.5281/zenodo.7079732
105First-Principle Coarse-Graining Framework for Scale-Free Bell-Like Association and Dissociation Rates in Thermal and Active Systems
J. A. Janeš, C. Monzel, D. Schmidt, R. Merkel, U. Seifert, K. Sengupta, and A.-S. Smith
Phys. Rev. X 12, 031030, 2022
DOI: 10.1103/PhysRevX.12.031030 Download
104Inflammatory activation of FcgR and IFNgR pathways co-influence the differentiation and activity of osteoclasts
B. Grötsch, E. Schachtschabel, P. Tripal, B. Schmid, A.-S. Smith, G. A. Schett, and A. Bozec
Frontiers in Immunology, 2022
DOI: 10.3389/fimmu.2022.958974 Download
103Bis-Polyethylene Glycol-Functionalized Imidazolium Ionic Liquids: a Multi-Method Approach Towards Bulk and Surface Properties
V. Seidl, M. Bosch, U. Papp, M. Livraghi, Z. Zhai, C. Wick, T. M. Koller, P. Wasserscheid, F. Maier, A.-S. Smith, J. Bachmann, H.-P. Steinrück, and K. Meyer
Journal of Ionic Liquids, 2, 100041, 2022
DOI: 10.1016/j.jil.2022.100041 Download
102Hydrodynamic particle interactions in linear and radial viscosity gradients
S. Ziegler and A.-S. Smith
Journal of Fluid Mechanics, 943, A29, 2022
DOI: 10.1017/jfm.2022.421 Download
101Improving the Performance of Supported Ionic Liquid Phase Catalysts for the Ultra-Low-Temperature Water Gas Shift Reaction Using Organic Salt Additives
P. Wolf, C. R. Wick, J. Mehler, D. Blaumeiser, S. Schötz, T. Bauer, J. Libuda, D. Smith, A.-S. Smith, and M. Haumann
ACS Catalysis, 12, 5661-5672, 2022
DOI: 10.1021/acscatal.1c05979 Download
100Crowding competes with trapping to enhance interfacial diffusion
M. Cvitković, D. Ghanti, N. Raake, and A.-S. Smith
EPJP
, 137, 355, 2022
DOI: 10.1140/epjp/s13360-022-02571-4 Download
99Physics of Organelle Membrane Bridging via Cytosolic Tethers is Distinct From Cell Adhesion
M. A. Kamal, J. A. Janeš, L. Li, F. Thibaudau, A.-S. Smith, and K. Sengupta
Frontiers in Physics, 9, 750539, 2022
DOI: 10.3389/fphy.2021.750539 Download

2021

98Glycerol as a Substrate and Inactivator of Coenzyme B-12-Dependent Diol Dehydratase
L. Bilić, D. Barić, G. M. Sandala, D. M. Smith, B. Kovačević
Chem. Eur. J., 27, 7930, 2021
DOI: 10.1002/chem.202100416
97Measuring Entropy Production at the Mesoscale
A.-S. Smith
Physics, 14, 152, 2021
DOI: 10.1103/Physics.14.152 Download
96Biomechanics as driver of aggregation of tethers in adherent membranes
L. Li, M. A. Kamal, B. H. Stumpf, F. Thibaudau, K. Sengupta, and A.-S. Smith
Soft Matter, 17, 10101-10107, 2021
DOI: 10.1039/D1SM00921D Download
95Configurational Forces in Bond Order Potentials
S. E. Birang O., A.-S. Smith, and P. Steinmann
Proceedings in Applied Mathematics and Mechanics, 21, e202100160, 2021
DOI: 10.1002/pamm.202100160 Download
94Phonon-based thermal configurational forces: Definitions and applications in rupture of semiconductors
S. E. Birang O., A.-S. Smith, and P. Steinmann
Engineering Fracture Mechanics, 257, 108014, 2021
DOI: 10.1016/j.engfracmech.2021.108014 Download
93Protein induced lipid demixing in homogeneous membranes
B. H. Stumpf, P. Nowakowski, A. Honigmann, C. Eggeling, A. Maciołek, and A.-S. Smith
Phys. Rev. Research
, 3, L042013, 2021
DOI: 10.1103/PhysRevResearch.3.L042013 Download
92Atomistic Configurational Forces in Crystalline Fracture
E. Birang, H. S. Park, A.-S. Smith, and P. Steinmann
Forces in Mechanics, 4, 100044, 2021
DOI: 10.1016/j.finmec.2021.100044 Download
91An exact algorithm to detect the percolation transition in Molecular Dynamics simulations of cross-linking polymer networks
M. Livraghi, K. Höllring, C. Wick, D. Smith, and A.-S. Smith
J. Chem. Theory Comput., 17, 6449-6457, 2021
DOI: 10.1021/acs.jctc.1c00423 Download
Source-Code is available via: https://doi.org/10.5281/zenodo.6823422
90Six-Color Confocal Immunofluorescence Microscopy with 4-Laser Lines
L. Heger, J. Lühr, L. Amon, A.-S. Smith, N. Eissing, and D. Dudziak
Multiplexed Imaging. Methods in Molecular Biology, 2350, 21-30, 2021
DOI: 10.1007/978-1-0716-1593-5_2
89Molecular Forces in Liquid–Liquid Extraction
M. Špadina, J.-F. Dufrêche, S. Pellet-Rostaing, S. Marčelja, and T. Zemb
Langmuir, 37, 10637–10656, 2021
DOI: 10.1021/acs.langmuir.1c00673 Download
88Theoretical framework for two–microswimmer hydrodynamic interactions
S. Ziegler, T. Scheel, M. Hubert, J. Harting, and A.-S. Smith
New J. Phys., 23, 073041, 2021
DOI: 10.1088/1367-2630/ac1141 Download
87Atomistic Two-, Three- and Four-Body Potentials. Spatial and Material Settings
P. Steinmann, A.-S. Smith, E. Birang, A. McBride, and A. Javili
J Mech Phys Solids, 154, 104507, 2021
DOI: 10.1016/j.jmps.2021.104507 Download
86Mechanical Regulation of Epithelial Tissue Homeostasis
S. Kaliman, M. Hubert, C. Wollnik, L. Nuić, D. Vurnek, S. Gehrer, J. Lovrić, D. Dudziak, F. Rehfeld, and A.-S. Smith
Phys. Rev. X, 11, 031029, 2021
DOI: 10.1103/PhysRevX.11.031029 Download
85The Scallop Theorem and Swimming at the Mesoscale
M. Hubert, O. Trosman, Y. Collard, A. Sukhov, J. Harting, N. Vandewalle, and A.-S. Smith
Phys. Rev. Lett., 126, 224501, 2021
DOI: 10.1103/PhysRevLett.126.224501 Download
84From Water Solutions to Ionic Liquids with Solid State Nanopores as a Perspective to Study Transport and Translocation Phenomena
S. Marion, N. Vucemilovic-Alagic, M. Spadina, A. Radenovic, and A.-S. Smith
Small, 17, 2100777, 2021
DOI: 10.1002/smll.202100777 Download
83Molecular Scale Spatio-Chemical Control of the Activating-Inhibitory Signal Integration in NK Cells
E. Toledo, G. Le Saux, A. Edri, L. Li, M. Rosenberg, Y. Keidar, V. Bhingardive, O. Radinsky, U. Hadad, C. Di Primo, T. Buffeteau, A.-S. Smith, A. Porgador, and M. Schvartzman
Sci. Adv., 7, abc1640, 2021
DOI: 10.1126/sciadv.abc1640 Download
82Molecular biomechanics controls protein mixing and segregation in adherent membranes
L. Li, B. H. Stumpf, and A.-S. Smith
Int. J. Mol. Sci., 22, 3699, 2021
DOI: 10.3390/ijms22073699 Download
81Regimes of motion of magnetocapillary swimmers
A. Sukhov, M. Hubert, G. Grosjean, O. Trosman, S. Ziegler, Y. Collard, N. Vandewalle, A.‐S. Smith, and J. Harting
Eur. Phys. J. E, 44, 59, 2021
DOI: 10.1140/epje/s10189-021-00065-2 Download
80On the Control of Dispersion Interactions Between Biological Membranes and Protein Coated Biointerfaces
R. Blackwell, A. Hemmerle, A. Baer, M. Späth, W. Peukert, D. Parsons, K. Sengupta, and A.-S. Smith
J. Colloid Interface Sci., 598, 464-473, 2021
DOI: 10.1016/j.jcis.2021.02.078 Download

2020

79Maturation of monocyte-derived DCs leads to increased cellular stiffness, higher membrane fluidity, and changed lipid composition
J. J. Lühr, N. Alex, L. Amon, M. Kräter, M. Kubánková, E. Sezgin, C. H. K. Lehmann, L. Heger, G. F. Heidkamp, A.-S. Smith, V. Zaburdaev, R. Böckmann, I. Levental, M. L. Dustin, C. Eggeling, J. Guck, and D. Dudziak
Front. Immunol., 11, 590121, 2020
DOI: 10.3389/fimmu.2020.590121 Download
78Recent Advances and Prospects in the Research of Nascent Adhesions
B. H. Stumpf, A. Ambriović-Ristov, A. Radenovic and A.‐S. Smith
Front. Physiol., 11, 574371, 2020
DOI: 10.3389/fphys.2020.574371 Download
77Catalytic Flow With a Coupled Finite Difference – Lattice Boltzmann Scheme
N. Kulyk, D. Berger, A.-S. Smith, and J. Harting
Comput. Phys. Commun., 256, 107443, 2020
DOI: 10.1016/j.cpc.2020.107443
76Quantitative Structural Organization of Bulk Apical Membrane Traffic in Pollen Tubes
G. Grebnev, M. Cvitkovic, C. Fritz, G. Cai, A.-S. Smith, and B. Kost
Plant Physiol., 183, 1559-1585, 2020
DOI: 10.1104/pp.20.00380 Download
75Adsorption of Aspartate Derivatives to Calcite Surfaces in Aqueous Environment
R. Stepić, L. Jurković, K. Klementyeva, M. Ukrainczyk, M. Gredičak, D. M. Smith, D. Kralj, and A.-S. Smith
Cryst. Growth Des., 20, 2853-2859, 2020
DOI: 10.1021/acs.cgd.0c00061 Download
74Structural characterization of an ionic liquid in bulk and in nano-confined environment using data from MD simulations
N. Vučemilović-Alagić, R. D. Banhatti, R. Stepić, C. R. Wick, D. Berger, M. U. Gaimann, A. Baer, J. Harting, D. M. Smith, and A.-S. Smith
Data in Brief, 28, 104794, 2020
DOI: 10.1016/j.dib.2019.104794 Download
73Cu Carbonyls Enhance the Performance of Ru-based SILP Water-Gas Shift Catalysts: A Combined in-situ DRIFTS and DFT Study
D. Blaumeiser, R. Stepić, P. Wolf, C. R. Wick, M. Haumann, P. Wasserscheid, D. M. Smith, A.-S. Smith, T. Bauer, and J. Libuda
Catal. Sci. Technol., 10, 252-262, 2020
DOI: 10.1039/C9CY01852B Download

2019

72Tunable bimodal explorations of space from memory-driven deterministic dynamics
M. Hubert, S. Perrard, M. Labousse, N. Vandewalle, Y. Couder
Phys. Rev. E, 100, 032201, 2019
DOI: 10.1103/PhysRevE.100.032201 Download
71A general perturbative approach for bead-based microswimmers reveals rich self-propulsion phenomena
S. Ziegler, M. Hubert, N. Vandewalle, J. Harting, and A.-S. Smith
New J. Phys., 21, 113017, 2019
DOI: 10.1088/1367-2630/ab4fc2 Download
70Exploring Reactive Conformations of Coenzyme A during Binding and Unbinding to Pyruvate Formate-Lyase
M. Hanževački, R. D. Banhatti, K. Čondić-Jurkić, A.-S. Smith, and D. M. Smith
J. Phys. Chem. A, 123, 9345–9356, 2019
DOI: 10.1021/acs.jpca.9b06913 Download
69Capillary assemblies in a rotating magnetic field
G. Grosjean, M. Hubert, Y. Collard, A. Sukhov, J. Harting, A.-S. Smith, and N. Vandewalle
Soft Matter, 15, 9093-9103, 2019
DOI: 10.1039/C9SM01414D Download
68A comprehensive Brownian Dynamics approach for the determination of non-ideality parameters from analytical ultracentrifugation
M. J. Uttinger, S. E. Wawra, T. Guckeisen, J. Walter, A. Baer, T. Thajudeen, P. J. Sherwood, A. Smith, A. M. Wagemans, W. F. Stafford, and W. Peukert
Langmuir, 35, 11491-11502, 2019
DOI: 10.1021/acs.langmuir.9b01916 Download
67Geometric Effects in Random Assemblies of Ellipses
J. Lovrić, S. Kaliman, W. Barfuß, G. E. Schröder-Turk, and A.-S. Smith
Soft Matter, 15, 8566-8577, 2019
DOI: 10.1039/C9SM01067J Download
66The Impact of Rate Formulations on Stochastic Molecular Motor Dynamics
R. Blackwell, D. Jung, M. Bukenberger, and A.-S. Smith
Sci Rep, 9, 18373, 2019
DOI: 10.1038/s41598-019-54344-2 Download
65Optimal motion of triangular magnetocapillary swimmers
A. Sukhov, S. Ziegler, Q. Xie, O. Trosman, J. Pande, G. Grosjean, M. Hubert, N. Vandewalle, A.-S. Smith, and J. Harting
J. Chem. Phys., 151, 124707, 2019
DOI: 10.1063/1.5116860 Download
64Improving the Performance of Supported Ionic Liquid Phase (SILP) catalysts for the Ultra-Low-Temperature Water-Gas Shift Reaction Using Metal Salt Additives
P. Wolf, M. Aubermann, M. Wolf, T. Bauer, D. Blaumeiser, R. Stepić, C. R. Wick, D. M. Smith, A.-S. Smith, P. Wasserscheid, J. Libuda, and M. Haumann
Green Chem., 21, 5008-5018, 2019
DOI: 10.1039/C9GC02153A Download
63Statistical Mechanics of an Elastically Pinned Membrane: Equilibrium Dynamics and Power Spectrum
J. A. Janeš, D. Schmidt, R. Blackwell, U. Seifert, and A.-S. Smith
Biophys. J., 117, 542-552, 2019
DOI: 10.1016/j.bpj.2019.06.036 Download
62Computational Study of Glycerol Binding within the Active Site of Coenzyme B12-Dependent Diol Dehydratase
L. Bilić, D. Barić, R. D. Banhatti, D. M. Smith, and B. Kovačević
J. Phys. Chem. B, 123, 6178-6187, 2019
DOI: 10.1021/acs.jpcb.9b04071 Download
61Insights from Molecular Dynamics Simulations on Structural Organization and Diffusion of an Ionic Liquid at Solid and Vacuum Interfaces
N. Vučemilović-Alagić, R. D. Banhatti, R. Stepić, C. R. Wick, D. Berger, M. U. Gaimann, A. Baer, J. Harting, D. M. Smith, and A.-S. Smith
J. Colloid Interface Sci., 553, 350-363, 2019
DOI: 10.1016/j.jcis.2019.06.017
60The Influence of Chemical Change on Protein Dynamics: A Case Study with Pyruvate Formate-Lyase
M. Hanževački, K. Čondić-Jurkić, R. D. Banhatti, A.-S. Smith, and D. M. Smith
Chem. Eur. J., 25, 8741-8753, 2019
DOI: 10.1002/chem.201900663 Download Cover Profile
59Water in an Electric Field does not Dance Alone: The relation between equilibrium structure, time dependent viscosity and molecular motions
A. Baer, Z. Miličević, D. M. Smith, and A.-S. Smith
J. Mol. Liq., 282, 303-315, 2019
DOI: 10.1016/j.molliq.2019.02.055 Download
58Semi-automatic Cell Correspondence Analysis using Iterative Point Cloud Registration
S. Chen*, S. Gehrer*, S. Kaliman, N. Ravikumar, A. Becit, M. Aliee, D. Dudziak, R. Merkel, A.-S. Smith, and A. Maier
Informatik-Aktuell, Bildverarbaitung fur die Medizin, 116-121, 2019
DOI: 10.1007/978-3-658-25326-4_26 Download
57Universal Hidden Order in Amorphous Cellular Geometries
M. A. Klatt, J. Lovrić, D. Chen, S. C. Kapfer, F. M. Schaller, P. W. A. Schönhöfer, B. S. Gardiner, A.-S. Smith, G. E. Schröder-Turk, and S. Torquato
Nat. Comm., 10, 811, 2019
DOI: 10.1038/s41467-019-08360-5 Download
56Adhesion of Biological Membranes
K. Sengupta and A.-S. Smith
in Physics of Biological Membranes, edt. P. Bassereau and P. Sens, Springer, 499-535, 2019
DOI: 10.1007/978-3-030-00630-3
55Measuring GUV adhesion
A.-S. Smith and K. Sengupta
in The Giant Vesicle Book, edt. R. Dimova and C. Marques, Taylor and Francis, 2019
Abstract
54Statistical Mechanics of an Elastically Pinned Membrane: Static Profile and Correlations
J. A. Janeš, H. Stumpf, D. Schmidt, U. Seifert, and A.-S. Smith
Biophys. J., 116, 283-295, 2019
DOI: 10.1016/j.bpj.2018.12.003 Download
53Mechanism of the Water-Gas Shift Reaction Catalyzed by Efficient Ruthenium Based Catalysts
R. Stepić, C. R. Wick, V. Strobel, D. Berger, N. Vučemilović-Alagić, M. Haumann, P. Wasserscheid, A.-S. Smith, and D. M. Smith
Angew. Chem., 58, 741-745, 2019
DOI: 10.1002/anie.201811627 Download

2018

52Dynamic Equilibria in Supported Ionic Liquid Phase (SILP) Catalysis: In-Situ IR Spectroscopy Identifies [Ru(CO)xCly]n Species in Water Gas Shift Catalysis
T. Bauer, R. Stepić, P. Wolf, F. Kollhoff, W. Karawacka, C. R. Wick, M. Haumann, P. Wasserscheid, D. M. Smith, A.-S. Smith, and J. Libuda
Catal. Sci. Technol. 8, 344-357, 2018
DOI: 10.1039/C7CY02199B Download

2017

51Structural basis for the shielding function of the dynamic trypanosome variant surface glycoprotein coat
T. Bartossek, N. G. Jones, C. Schäfer, M. Cvitković, M. Glogger, H. R. Mott, J. Kuper, M. Brennich, M. Carrington, A.-S. Smith, S. Fenz, C. Kisker, and M. Engstler
Nature Microbiology 2, 1523-1532, 2017
DOI: 10.1038/s41564-017-0013-6
50Asymptotic expansions of the hypergeometric function with two large parameters—application to the partition function of a lattice gas in a field of traps
M. Cvitković, A.-S. Smith, and J. Pande
J. Phys. A: Math. Theor. 50, 265206, 2017
DOI: 10.1088/1751-8121/aa7213 Download
49Membrane fluctuations mediate lateral interaction between cadherin bonds
S. F. Fenz, T. Bihr, D. Schmidt, R. Merkel, U. Seifert, K. Sengupta, and A.-S. Smith
Nature Physics 13, 906-913, 2017
DOI: 10.1038/nphys4138 Download
48Effect of body deformability on microswimming
J. Pande, L. Merchant, T. Krüger, J. Harting, and A.-S. Smith
Soft Matter 13, 3984-3993, 2017
DOI: 10.1039/C7SM00181A Download
47Measuring the Invisible: Determining the Size of Growing Nanodomains Using the “Inverse FCS”
S. F. Fenz , A.-S. Smith, and C. Monzel
Biophysical Journal 112, 2245-2246, 2017
DOI: 10.1016/j.bpj.2017.04.014 Download
46Setting the pace of microswimmers: when increasing viscosity speeds up self-propulsion
J. Pande, L. Merchant, T. Krüger, J. Harting, and A.-S. Smith
New J. Phys. 19, 053024, 2017
DOI: 10.1088/1367-2630/aa6e3a Download
45Lattice Boltzmann simulations of the bead-spring microswimmer with a responsive stroke—from an individual to swarms
K. Pickl, J. Pande, H. Köstler, U. Rüde, and A.-S. Smith
J Phys.: Condens. Matter 29, 124001, 2017
DOI: 10.1088/1361-648X/aa5a40 Download
44Physical determinants of bipolar mitotic spindle assembly and stability in fission yeast
R. Blackwell, C. Edelmaier, O. Sweezy-Schindler, A. Lamson, Z. R. Gergely, E. O’Toole, A. Crapo, L. E. Hough, J. R. McIntosh, M. A. Glaser, and M. D. Betterton
Sci. Adv. 3, 1601603, 2017
DOI: 10.1126/sciadv.1601603 Download
43Radial growth in two dimensions revisited: The effect of finite density, binding affinity, reaction rates and diffusion
T. Bihr, F.-Z. Sadafi, U. Seifert, R. Klupp Taylor, and A.-S. Smith
Adv. Mater. Interfaces 4, 1600310, 2017
DOI: 10.1002/admi.201600310 Download

2016

42Limits of applicability of the Voronoi tessellation determined by centres of cell nuclei to epithelium morphology
S. Kaliman, C. Jayachandran, F. Rehfeldt, and A.-S. Smith
Front. Physiol. 7, 551, 2016
DOI: 10.3389/fphys.2016.00551 Download
41Alive and twitching
A.-S. Smith
Nat. Phys. 12, 378-379, 2016
DOI: 10.1038/nphys3703 Download
40Nanometric Thermal Fluctuations of Weakly Confined Bio-membranes Measured with Microsecond Time-Resolution
C. Monzel, D. Schmidt, U. Seifert, A.-S. Smith, R. Merkel, and K. Sengupta
Soft Matter 12, 4755-4768, 2016
DOI: 10.1039/C6SM00412A Download
39When do microswimmers exit the Stokes regime
K. Pickl, J. Pande, H. Köstler, A. Smith, and U. Rüde
arXiv publication, Article Number: 1603.04633, 2016
DOI: http://arxiv.org/pdf/1603.04633v1.pdf

2015

38Measuring fast stochastic displacements of bio-membranes with dynamic optical displacement spectroscopy
C. Monzel, D. Schmidt, C. Kleusch, D. Kirchenbüchler, U. Seifert, A.-S. Smith, K. Sengupta, and R. Merkel
Nat. Commun. 6, 8162, 2015
DOI: 10.1038/ncomms9162 Download
37Crowding of receptors induces ring-like adhesions in model membranes
D. Schmidt, T. Bihr, S. Fenz, R. Merkel, U. Seifert, K. Sengupta, and A.-S. Smith
BBA: Mol. Cell Res. 1853, 2984-2991, 2015
DOI: 10.1016/j.bbamcr.2015.05.025 Download
36Multiscale approaches to protein-mediated interactions between membranes-Relating microscopic and macroscopic dynamics in radially growing adhesions
T. Bihr, U. Seifert, and A.-S. Smith
New J. Phys. 17, 083016, 2015
DOI: 10.1088/1367-2630/17/8/083016 Download
35Complementary Molecular Dynamics and X-Ray Reflectivity Study of an Imidazolium-Based Ionic Liquid at a Neutral Sapphire Interface
Z. Brkljača, M. Klimczak, Z. Miličević, M. Weisser, N. Taccardi, P. Wasserscheid, D. M. Smith, A. Magerl, and A.-S. Smith
J. Phys. Chem. Lett. 6, 549-555, 2015
DOI: 10.1021/jz5024493 Download
34Forces and shapes as determinants of micro-swimming: effect on synchronisation and the utilisation of drag
J. Pande and A.-S. Smith
Soft Matter 11, 2364-2371, 2015
DOI: 10.1039/C4SM02611J Download

2014

33Liquid Crystalline Phase Formation in Suspensions of Solid Trimyristin Nanoparticles
S. Gehrer, M. Schmiele, M. Westermann, F. Steiniger, T. Unruh
J. Phys. Chem. B, 118, 38, 11387–11396, 2014
DOI: 10.1021/jp506787v
32Facile colloidal coating of polystyrene nanospheres with tunable gold dendritic patches
H. Bao, T. Bihr, A.-S. Smith, R.T Klupp
Nanoscale, 6, 3954-3966, 2014
DOI: 10.1039/C3NR04016J
31Parallel Simulations of Self-propelled Microorganisms
K. Pickl, M. Hofmann, T. Preclik, H. Köstler, A.-S. Smith, U. Rüde
Advances in Parallel Computing, 25, 395-404, 2016
DOI: 10.3233/978-1-61499-381-0-395 Download
30Association Rates of Membrane-Coupled Cell Adhesion Molecules
T. Bihr, S. Fenz, E. Sackmann, R. Merkel, U. Seifert, K. Sengupta, A.-S. Smith
Biophys. J. 107, L33-L36, 2014
DOI: 10.1016/j.bpj.2014.10.033 Download
29Calculating CD Spectra of Flexible Peptides: An Assessment of TD-DFT Functionals
Z. Brkljača, M. Mališ, D. M. Smith, and A.-S. Smith
J. Chem. Theory Comput. 10, 3270-3279, 2014
DOI: 10.1021/ct500071t Download
28Establishing conditions for simulating hydrophobic solutes in electric fields by molecular dynamics
Z. Miličević, S. J. Marrink, A.-S. Smith, and D. M. Smith
J. Mol. Model. 20, 2359, 2014
DOI: 10.1007/s00894-014-2359-5 Download
27Signature of a Nonharmonic Potential as Revealed from a Consistent Shape and Fluctuation Analysis of an Adherent Membrane
D. Schmidt, C. Monzel, T. Bihr, R. Merkel, U. Seifert, K. Sengupta, and A.-S. Smith
Phys. Rev. X 4, 021023, 2014
DOI: 10.1103/PhysRevX.4.021023 Download
26Novel Growth Regime of MDCK II Model Tissues on Soft Substrates
S. Kaliman, C. Jayachandran, F. Rehfeld, and A.-S. Smith
Biophys. J. 106, L25-L28, 2014
DOI: 10.1016/j.bpj.2013.12.056 Download
25Rhodomyrtals A–D, four unusual phloroglucinol-sesquiterpene adducts from Rhodomyrtus psidioides
Q. Shou, J. E. Smith, H. Mon, Z. Brkljača, A.-S. Smith, D. M. Smith, H. J. Griesser, and Hans Wohlmuth
RSC Adv. 4, 13514-13517, 2014
DOI: 10.1039/C4RA00154K Download
24Facile colloidal coating of polystyrene nanospheres with tunable gold dendritic patches
H. Bao, T. Bihr, A.-S. Smith, and R. N. Klupp Taylor
Nanoscale 6, 3954-3966, 2014
DOI: 10.1039/C3NR04016J Download
23Physics of cell adhesion: some lessons from cell-mimetic systems
E. Sackmann and A.-S. Smith
Soft Matter 10, 1644-1659, 2014
DOI: 10.1039/C3SM51910D Download

2012

22Nucleation of Ligand-Receptor Domains in Membrane Adhesion
T. Bihr, U. Seifert, and A.-S. Smith
Phys. Rev. Lett. 109, 258101, 2012
DOI: 10.1103/PhysRevLett.109.258101 Download
21Coexistence of dilute and densely packed domains of ligand-receptor bonds in membrane adhesion
D. Schmidt, T. Bihr, U. Seifert, and A.-S. Smith
EPL 99, 38003, 2012
DOI: 10.1209/0295-5075/99/38003 Download
20All good things come in threes—Three beads learn to swim with lattice Boltzmann and a rigid body solver
K. Pickl, J. Götz, K. Iglberger, J. Pande, K. Mecke, A.-S. Smith, and U. Rüde
J. Comput. Sci. 3, 374-387, 2012
DOI: 10.1016/j.jocs.2012.04.009 Download
19Calculation of the CD Spectrum of a Peptide from Its Conformational Phase Space: The Case of Met-enkephalin and Its Unnatural Analogue
Z. Brkljača, K. Čondić-Jurkić, A.-S. Smith, and D. M. Smith
J. Chem. Theory Comput. 8, 1694-1705, 2012
DOI: 10.1021/ct200868y Download
18The Protonation States of the Active-Site Histidines in (6–4) Photolyase
K. Čondić-Jurkić, A.-S. Smith, H. Zipse, and D. M. Smith
J. Chem. Theory Comput. 8, 1078-1091, 2012
DOI: 10.1021/ct2005648 Download

2011

17Switching from Ultraweak to Strong Adhesion
S. F. Fenz, T. Bihr, R. Merkel, U. Seifert, K. Sengupta, and A.-S. Smith
Adv. Mater. 23, 2622-2626, 2011
DOI: 10.1002/adma.201004097 Download
16Inter-membrane adhesion mediated by mobile linkers: Effect of receptor shortage
S. F. Fenz, A.-S. Smith, R. Merkel, and K. Sengupta
Soft Matter 7, 952-962, 2011
DOI: 10.1039/C0SM00550A Download
15Two intertwined facets of adherent membranes: membrane roughness and correlations between ligand–receptors bonds
E. Reister, T. Bihr, U. Seifert, and A.-S. Smith
New J. Phys. 13, 025003, 2011
DOI: 10.1088/1367-2630/13/2/025003 Download

2010

14Physics challenged by cells
A.-S. Smith
Nat. Phys. 6, 726-729, 2010
DOI: 10.1038/nphys1798 Download
13Inferring spatial organization of bonds within adhesion clusters by exploiting fluctuations of soft interfaces
A.-S. Smith, S. F. Fenz, and K. Sengupta
EPL 89, 28003, 2010
DOI: 10.1209/0295-5075/89/28003 Download

2009

12Progress in Mimetic Studies of Cell Adhesion and the Mechanosensing
A.-S. Smith and E. Sackmann
ChemPhysChem 10, 66-78, 2009
DOI: 10.1002/cphc.200800683 Download

2008

11Dynamics of Specific Vesicle-Substrate Adhesion: From Local Events to Global Dynamics
E. Reister-Gottfried, K. Sengupta, B. Lorz, E. Sackmann, U. Seifert, and A.-S. Smith
Phys. Rev. Lett. 101, 208103, 2008
DOI: 10.1103/PhysRevLett.101.208103 Download
10Force-induced growth of adhesion domains is controlled by receptor mobility
A.-S. Smith, K. Sengupta, S. Goennenwein, U. Seifert, and E. Sackmann
Proc. Natl. Acad. Sci. U.S.A. 105, 6906-6911, 2008
DOI: 10.1073/pnas.0801706105 Download

2007

9Adhesion of Giant Vesicles Mediated by Weak Binding of Sialyl-LewisX to E-Selectin in the Presence of Repelling Poly(ethylene glycol) Molecules
B. G. Lorz, A.-S. Smith, C. Gege, and Erich Sackmann
Langmuir 23, 12293-12300, 2007
DOI: 10.1021/la701824q Download
8Vesicles as a model for controlled (de-)adhesion of cells: a thermodynamic approach
A.-S. Smith and U. Seifert
Soft Matter 3, 275-289, 2007
DOI: 10.1039/B611892E Download

2006

7Force-Controlled Equilibria of Specific Vesicle-Substrate Adhesion
A.-S. Smith, B. G. Lorz, S. Goennenwein, and E. Sackmann
Biophys. J. 90, L52-L54, 2006
DOI: 10.1529/biophysj.105.079426 Download
6Antagonist-Induced Deadhesion of Specifically Adhered Vesicles
A.-S. Smith, B. G. Lorz, U. Seifert, and E. Sackmann
Biophys. J. 90, 1064-1080, 2006
DOI: 10.1529/biophysj.105.062166 Download

2005

5The total solute-water correlation function for Lennard-Jones particles
A.-S. Smith
Fizika A-Zagreb 14, 187-194, 2005
Abstract Download
4Force-Induced De-Adhesion of Specifically Bound Vesicles:  Strong Adhesion in Competition with Tether Extraction
A.-S. Smith and U. Seifert
Langmuir 21, 11357-11367, 2005
DOI: 10.1021/la051303f Download
3Effective adhesion strength of specifically bound vesicles
A.-S. Smith and U. Seifert
Phys. Rev. E 71, 061902, 2005
DOI: 10.1103/PhysRevE.71.061902 Download

2004

2Pulling Tethers from Adhered Vesicles
A.-S. Smith, E. Sackmann, and U. Seifert
Phys. Rev. Lett. 92, 208101, 2004
DOI: 10.1103/PhysRevLett.92.208101 Download

2003

1Effects of a pulling force on the shape of a bound vesicle
A.-S. Smith, E. Sackmann, and U. Seifert
Europhys. Lett. 64, 281, 2003
DOI: 10.1209/epl/i2003-00499-9 Download